PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0304s0050.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 430aa    MW: 47950.1 Da    PI: 4.6313
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0304s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1033.9e-32571971128
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknrat 78 
                             lp+G++F+P+d+e++++ L+k  +g       +  +e+i++vd    i++++P++Lp  vk++ +  +fF+++ k+y+ g+rk+r++
  SapurV1A.0304s0050.1.p  57 LPRGVKFDPSDQEIIWHLLAKASDGGIkphpfI--KEFIPTVDnddgICYTHPQNLP-GVKQDGSISHFFHRAIKAYSIGTRKRRKI 140
                             799************888887777765664322..345777755667**********.677777888******************86 PP

                     NAM  79 k......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                             +      + +W++tg++k+v++ +g ++g+kk++v+y  + r  k+ekt+Wvmh+y+l
  SapurV1A.0304s0050.1.p 141 QgdnlggDVRWHKTGRTKPVIV-DGIQKGCKKIMVLYtsTVRGGKAEKTNWVMHQYHL 197
                             6566655788************.99************5545888999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-3742216IPR003441NAC domain
PROSITE profilePS5100530.11157216IPR003441NAC domain
PfamPF023654.3E-1458197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MAGPWLVDGN RFATKIKSAS GASDLERVEW KSDPCKTCPN CHHAIDNSDV VQEWPGLPRG  60
VKFDPSDQEI IWHLLAKASD GGIKPHPFIK EFIPTVDNDD GICYTHPQNL PGVKQDGSIS  120
HFFHRAIKAY SIGTRKRRKI QGDNLGGDVR WHKTGRTKPV IVDGIQKGCK KIMVLYTSTV  180
RGGKAEKTNW VMHQYHLGTG EDECDGEFVV SKIFYQQQQA NKGEKPEEHL SEIVDEMVAK  240
VSPVTPKSVT PEPPRAERRC QDTELGQEST NICTDPCAQQ PGIECVEEDV NLQHENPSYV  300
DQLETENDVN HMEGDNDNCA EEERKWWDSE SQQLLDSQQL VEGLSLCAEF LQSQSPNRGG  360
HGTEANGKTG LSDYALLGPE YLKEDLEECQ KLELDQANVE LDTPSEFRLS QLEFGSQDSF  420
TAWGQSQVG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002315960.10.0hypothetical protein POPTR_0010s13980g
SwissprotQ6NQK21e-171NAC8_ARATH; NAC domain-containing protein 8
TrEMBLB9HWM00.0B9HWM0_POPTR; Uncharacterized protein
STRINGPOPTR_0010s13980.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56623354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-164NAC family protein